Working in a bioinformatics service group is like working in Air Traffic Control.
Here are the slides I just presented at the Cloud Computing Workshop at Bio-IT World Europe 2010 in Hannover, Germany. Other speakers included Dave Powers from CycleComputing, and Glenn Proctor from the EBI, both of whom presented very interesting..
This should be common sense really, but the weakest point of any software system is the point that is non-redundant and cannot be avoided. No matter how many alternative paths you have that pass through that point, if none of the paths can get to..
As a cloud application developer, shared storage on EC2 is particularly challenging when GBs of data has to be accessed by 100s of EC2 instances. One particular option we explored is leveraging our Amazon S3 storage to mount on EC2 instances and use..
As Eagle expands, we hire new staff from time-to-time to cope with the increased workload. (We're not currently hiring by the way, this is a general comment piece...)
In a couple of weeks I shall be attending the ECCB10 conference in Ghent. I have just been reading through the talks and needless to say it looks interesting. I shall be presenting a poster this time, on "An Ensembl-based pipeline for microRNA..
In February 2008 I attended a BioHackathon held at DBCLS in Tokyo to work on semantic data in open-source bioinformatics toolkits. My role at the time was to represent BioJava along with my erstwhile BioJava colleague Mark Schreiber, and the two of..
Eagle's DebianMed contribution of a fully-working .deb file to install Ensembl is almost complete. The demonstration version 57 contains only minor issues now that need to be resolved before it can be released through the Debian package management..